Package: pedtricks 0.4.3

pedtricks: Visualize, Summarize and Simulate Data from Pedigrees

Sensitivity and power analysis, for calculating statistics describing pedigrees from wild populations, and for visualizing pedigrees. This is a reboot of the methods developped by Morrissey and Wilson (2010) <doi:10.1111/j.1755-0998.2009.02817.x>

Authors:Julien Martin [aut, cre], Matthew Wolak [aut], Susan Johnston [aut], Michael Morrissey [aut]

pedtricks_0.4.3.tar.gz
pedtricks_0.4.3.zip(r-4.5)pedtricks_0.4.3.zip(r-4.4)pedtricks_0.4.3.zip(r-4.3)
pedtricks_0.4.3.tgz(r-4.4-any)pedtricks_0.4.3.tgz(r-4.3-any)
pedtricks_0.4.3.tar.gz(r-4.5-noble)pedtricks_0.4.3.tar.gz(r-4.4-noble)
pedtricks_0.4.3.tgz(r-4.4-emscripten)pedtricks_0.4.3.tgz(r-4.3-emscripten)
pedtricks.pdf |pedtricks.html
pedtricks/json (API)
NEWS

# Install 'pedtricks' in R:
install.packages('pedtricks', repos = c('https://juliengamartin.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/juliengamartin/pedtricks/issues

Datasets:
  • WarblerG - Seychelles Warbler Genotypes
  • gryphons - Example dataset for pedtricks examples and tutorial

On CRAN:

19 exports 1 stars 1.39 score 58 dependencies 1 scripts 64 downloads

Last updated 5 days agofrom:a5ce75084f. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 13 2024
R-4.5-winNOTESep 13 2024
R-4.5-linuxNOTESep 13 2024
R-4.4-winNOTESep 13 2024
R-4.4-macNOTESep 13 2024
R-4.3-winNOTESep 13 2024
R-4.3-macNOTESep 13 2024

Exports:convert_peddraw_peddraw_pedAdrawPedigreeextractAfix_pedfixPedigreegenome_simgenomesimggpedigreemakemakePedigreeFactormakePedigreeNumericmicro_simmicrosimped_statspedigreeStatpedStatSummaryphen_simphensim

Dependencies:apeclicodacolorspacecombinatcorpcorcpp11cubaturedigestdplyrevaluatefansifarvergdatagenericsgeneticsggplot2gluegtablegtoolshighrigraphisobandkinship2knitrlabelinglatticelifecyclemagrittrMASSMatrixMCMCglmmmgcvmunsellmvtnormnadivnlmepillarpkgconfigpurrrquadprogR6RColorBrewerRcpprlangscalesstringistringrtensorAtibbletidyrtidyselectutf8vctrsviridisLitewithrxfunyaml